The breeding ecology of the Merlin (<i>Falco columbarius aesalon</i>), with particular reference to north-east Scotland and land-use change

The breeding population of the Merlin in Britain in 1993 and 1994 was estimated at 1300 ± 200 pairs following a survey of around 60% of the range and calculated extrapolation of the remaining suitable habitat. This reflected a recovery, following widespread declines in numbers and range earlier in the 20th century. Over 1000 nest records from the survey were analysed, with habitat and nest site described and quantified, and related to clutch size, successful brood size and productivity. Heather moor or mixed grass-heather moor, and tall conifer plantations were the main core habitats at 88% and 9% of territories respectively. Habitat choice influenced nest site, with 77% of nests on the ground, 2% on crags and 19% in trees. Productivity averaged 2.25 fledged young per pair and was indicative of a stable or increasing population. In north-east Scotland, part of a delimited Merlin study area was afforested with conifers, providing an opportunity to monitor the effects of this land-use change on Merlin breeding ecology. One of the forestry schemes led to public outcry, official objections, Government assessment, judicial Review and an appeal to the European Commission. These events were unprecedented in British forestry history and were seen as a test-case. Despite modifications to the scheme, by leaving approximately 30% of land unpianted, the Merlins declined to zero, as they also did at the other afforested areas. Breeding phenology and clutch size at the afforested areas were similar to comparable adjacent and further afield Merlin study areas, where there was minimal change in habitat management. However, productivity was significantly less and it was concluded that commercially afforested moorland was an inappropriate breeding habitat for Merlin in north-east Scotland. Identifying and quantifying prey remains assessed breeding season diet, with small birds accounting for 95% of numbers and 99% of biomass from 11,225 items. It is reasoned that the majority of the new potential prey resource associated with commercial afforestation was unavailable for Merlin, due to the protection provided by dense thicket plantations. Guidelines for retaining breeding Merlin within commercial forestry schemes in Britain are recommended. These could be requested by conservation planners, adopted by foresters or tested by raptor ecologists, and their use could be a condition within new grant-aided forestry schemes in Britain

Postfledging Survival, Movements, and Dispersal of Ring Ouzels (Turdus torquatus)

We thank Invercauld Estate for cooperation with access to Glen Clunie. S. Redpath, J. Wilson, and S. Roos provided valuable comments on the manuscript. This study was funded by the Royal Society for the Protection of Birds, Scottish Natural Heritage, and the Cairngorms National Park Authority. J.L.L. was supported by the Natural Environment Research Council.Peer reviewedPublisher PD

A fast 3D reconstruction system with a low-cost camera accessory

Photometric stereo is a three dimensional (3D) imaging technique that uses multiple 2D images, obtained from a fixed camera perspective, with different illumination directions. Compared to other 3D imaging methods such as geometry modeling and 3D-scanning, it comes with a number of advantages, such as having a simple and efficient reconstruction routine. In this work, we describe a low-cost accessory to a commercial digital single-lens reflex (DSLR) camera system allowing fast reconstruction of 3D objects using photometric stereo. The accessory consists of four white LED lights fixed to the lens of a commercial DSLR camera and a USB programmable controller board to sequentially control the illumination. 3D images are derived for different objects with varying geometric complexity and results are presented, showing a typical height error of &lt;3 mm for a 50 mm sized object

Galaxy And Mass Assembly (GAMA): understanding the wavelength dependence of galaxy structure with bulge-disc decompositions

With a large sample of bright, low-redshift galaxies with optical–near-IR imaging from the GAMA survey we use bulge-disc decompositions to understand the wavelength-dependent behaviour of single-Sersic structural measurements. We denote the variation in single-Sersic index with wavelength as N, likewise for effective radius we use R. We find that most galaxies with a substantial disc, even those with no discernable bulge, display a high value of N. The increase in Sersic index to longer wavelengths is therefore intrinsic to discs, apparently resulting from radial variations in stellar population and/or dust reddening. Similarly, low values of R (< 1) are found to be ubiquitous, implying an element of universality in galaxy colour gradients. We also study how bulge and disc colour distributions vary with galaxy type. We find that, rather than all bulges being red and all discs being blue in absolute terms, both components become redder for galaxies with redder total colours. We even observe that bulges in bluer galaxies are typically bluer than discs in red galaxies, and that bulges and discs are closer in colour for fainter galaxies. Trends in total colour are therefore not solely due to the colour or flux dominance of the bulge or disc

Adaptation and conservation insights from the koala genome

The koala, the only extant species of the marsupial family Phascolarctidae, is classified as ‘vulnerable’ due to habitat loss and widespread disease. We sequenced the koala genome, producing a complete and contiguous marsupial reference genome, including centromeres. We reveal that the koala’s ability to detoxify eucalypt foliage may be due to expansions within a cytochrome P450 gene family, and its ability to smell, taste and moderate ingestion of plant secondary metabolites may be due to expansions in the vomeronasal and taste receptors. We characterized novel lactation proteins that protect young in the pouch and annotated immune genes important for response to chlamydial disease. Historical demography showed a substantial population crash coincident with the decline of Australian megafauna, while contemporary populations had biogeographic boundaries and increased inbreeding in populations affected by historic translocations. We identified genetically diverse populations that require habitat corridors and instituting of translocation programs to aid the koala’s survival in the wild

Galaxy and Mass Assembly (GAMA): the wavelength dependence of galaxy structure versus redshift and luminosity

We study how the sizes and radial profiles of galaxies vary with wavelength, by fitting Se´rsic functions simultaneously to imaging in nine optical and near-infrared bands. To quantify the wavelength dependence of effective radius we use the ratio, R, of measurements in two rest- frame bands. The dependence of Se´rsic index on wavelength, N , is computed correspondingly. Vulcani et al. have demonstrated that different galaxy populations present sharply contrasting behaviour in terms of R and N . Here we study the luminosity dependence of this result. We find that at higher luminosities, early-type galaxies display a more substantial decrease in effective radius with wavelength, whereas late types present a more pronounced increase in Se´rsic index. The structural contrast between types thus increases with luminosity. By considering samples at different redshifts, we demonstrate that lower data quality reduces the apparent difference between the main galaxy populations. However, our conclusions remain robust to this effect. We show that accounting for different redshift and luminosity selections partly reconciles the size variation measured by Vulcani et al. with the weaker trends found by other recent studies. Dividing galaxies by visual morphology confirms the behaviour inferred using morphological proxies, although the sample size is greatly reduced. Finally, we demonstrate that varying dust opacity and disc inclination can account for features of the joint distribution of R and N for late-type galaxies. However, dust does not appear to explain the highest values of R and N . The bulge–disc nature of galaxies must also contribute to the wavelength dependence of their structure. Key words: galaxies: formation – galaxies: fundamental parameters – galaxies: general – galaxies: structure

Breast cancer metastasis suppressor 1 (BRMS1) inhibits osteopontin transcription by abrogating NF-κB activation

BACKGROUND: Osteopontin (OPN), a secreted phosphoglycoprotein, has been strongly associated with tumor progression and aggressive cancers. MDA-MB-435 cells secrete very high levels of OPN. However metastasis-suppressed MDA-MB-435 cells, which were transfected with breast cancer metastasis suppressor 1 (BRMS1), expressed significantly less OPN. BRMS1 is a member of mSin3-HDAC transcription co-repressor complex and has been shown to suppress the metastasis of breast cancer and melanoma cells in animal models. Hence we hypothesized that BRMS1 regulates OPN expression. RESULTS: The search for a BRMS1-regulated site on the OPN promoter, using luciferase reporter assays of the promoter deletions, identified a novel NF-κB site (OPN/NF-κB). Electrophoretic mobility shift assays and chromatin immunoprecipitations (ChIP) confirmed this site to be an NF-κB-binding site. We also show a role of HDAC3 in suppression of OPN via OPN/NF-κB. CONCLUSION: Our results show that BRMS1 regulates OPN transcription by abrogating NF-κB activation. Thus, we identify OPN, a tumor-metastasis activator, as a crucial downstream target of BRMS1. Suppression of OPN may be one of the possible underlying mechanisms of BRMS1-dependent suppression of tumor metastasis